- Predicted Gene MLOC_59790
MLOC_59790 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_59790_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_59790_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 69.9932 | 48.0225 | 50.0698 | 49.7944 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 78.1061 | 5.69114 | 25.3115 | 27.1424 |
INF1 | Young developing inflorescences (5mm) | 42.4259 | 41.25 | 31.8059 | 33.5026 |
INF2 | Developing inflorescences (1-1.5 cm) | 12.8725 | 16.7857 | 13.4758 | 16.2781 |
ROO | Roots from the seedlings (10 cm shoot stage) | 33.6915 | 19.9287 | 25.1508 | 21.1401 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.148754 | 0.0536717 | 0.0328285 | 0.0933154 |
CAR5 | Developing grain, bracts removed (5 DPA) | 61.2656 | 62.9231 | 58.032 | 59.2306 |
CAR15 | Developing grain, bracts removed (15 DPA) | 2.06331 | 0.652688 | 2.97751 | 4.41845 |
CDS Structure of MLOC_59790
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_59790.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g08790.1 |
-3 |
0.0 |
627 |
352/415 (85%) |
13103.m01017 protein aspartic proteinase nepenthesin precursor, putative, expressed |
TAIR PP10 |
AT1G09750.1 |
-3 |
3e-109 |
338 |
214/405 (53%) |
Eukaryotic aspartyl protease family protein | chr1:3157541-3158960 FORWARD LENGTH=449 |