MLOC_59788 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.7746051.023321.079631.04921
LEAShoots from the seedlings (10 cm shoot stage)0.9988670.8200330.8038130.834978
INF1Young developing inflorescences (5mm)2.381782.806722.496952.31232
INF2Developing inflorescences (1-1.5 cm)4.078493.605323.898184.45093
ROORoots from the seedlings (10 cm shoot stage)0.2590440.6261370.5218160.795111
NODDeveloping tillers at six leaf stage, 3rd internode0.4271610.4252620.7045261.89495
CAR5Developing grain, bracts removed (5 DPA)1.324591.36461.748881.56626
CAR15Developing grain, bracts removed (15 DPA)1.244420.9038731.13572.64539



CDS Structure of MLOC_59788






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_59788.6
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_59788.6CUST_14037_PI427708080AvailableAvailablecontig_43912 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g17700.1 +1 0.0 818 410/498 (82%) 13102.m01977 protein pyridine nucleotide-disulphide oxidoreductase domain containing protein, expressed
TAIR PP10 AT4G32360.1 +1 0.0 610 312/479 (65%) Pyridine nucleotide-disulphide oxidoreductase family protein | chr4:15621550-15624711 FORWARD LENGTH=483