MLOC_59774 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.6413811.31667.683677.29512
LEAShoots from the seedlings (10 cm shoot stage)22.502111.94898.5946912.1945
INF1Young developing inflorescences (5mm)12.36389.604868.268467.97003
INF2Developing inflorescences (1-1.5 cm)8.193046.959298.322757.68076
ROORoots from the seedlings (10 cm shoot stage)0.3995381.609711.157861.57858
NODDeveloping tillers at six leaf stage, 3rd internode1.906952.728782.547498.44561
CAR5Developing grain, bracts removed (5 DPA)6.014844.935296.069774.96423
CAR15Developing grain, bracts removed (15 DPA)0.7451840.5191050.8212841.3866



CDS Structure of MLOC_59774






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_59774.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_59774.1CUST_12848_PI427708083AvailableAvailablecontig_43900 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g07310.1 -2 1e-104 336 163/175 (93%) 13107.m00711 protein polynucleotide phosphorylase, putative, expressed
TAIR PP10 AT3G03710.1 -2 6e-85 283 134/176 (76%) | Symbols: RIF10, PNP | polyribonucleotide nucleotidyltransferase, putative | chr3:919542-924906 FORWARD LENGTH=922