MLOC_59746 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.800096.817136.904278.04342
LEAShoots from the seedlings (10 cm shoot stage)1.942750.4418510.808360.930947
INF1Young developing inflorescences (5mm)1.340420.5636050.6818610.818286
INF2Developing inflorescences (1-1.5 cm)0.7525630.5052470.8548150.862587
ROORoots from the seedlings (10 cm shoot stage)2.747915.089783.103386.38894
NODDeveloping tillers at six leaf stage, 3rd internode5.938835.5492910.304921.382
CAR5Developing grain, bracts removed (5 DPA)0.2767640.1957180.0658680.205056
CAR15Developing grain, bracts removed (15 DPA)0.189210.1100860.09242440.369639



CDS Structure of MLOC_59746






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_59746.4
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_59746.4CUST_14028_PI427708080AvailableAvailablecontig_43877 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g42924.1 +1 2e-125 379 234/304 (77%) 13107.m04499 protein dehydrogenase, putative, expressed
TAIR PP10 AT4G22110.2 +1 5e-98 260 166/286 (58%) GroES-like zinc-binding dehydrogenase family protein | chr4:11711422-11713946 REVERSE LENGTH=389