MLOC_59737 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains12.776925.48421.349220.8276
LEAShoots from the seedlings (10 cm shoot stage)18.61416.627513.809513.8231
INF1Young developing inflorescences (5mm)64.697162.155854.123149.7957
INF2Developing inflorescences (1-1.5 cm)60.075554.211649.154960.1074
ROORoots from the seedlings (10 cm shoot stage)5.5358820.829814.421.1459
NODDeveloping tillers at six leaf stage, 3rd internode2.884623.725797.1393914.5918
CAR5Developing grain, bracts removed (5 DPA)25.042823.489223.84123.4248
CAR15Developing grain, bracts removed (15 DPA)11.905512.08269.4550526.3532



CDS Structure of MLOC_59737






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_59737.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK372313NoneNoneNoneNone
MLOC_59737.1CUST_4184_PI427708080AvailableAvailablecontig_43872 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g04270.1 -1 0.0 1596 996/1310 (76%) 13102.m00437 protein DNA polymerase V, putative, expressed
TAIR PP10 AT5G64420.1 -1 0.0 845 537/1185 (45%) DNA polymerase V family | chr5:25756416-25761122 FORWARD LENGTH=1306