MLOC_59736 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains82.571978.932579.110686.2677
LEAShoots from the seedlings (10 cm shoot stage)25.390423.32921.785720.3028
INF1Young developing inflorescences (5mm)36.590238.171336.667133.0706
INF2Developing inflorescences (1-1.5 cm)23.330422.828122.300927.0451
ROORoots from the seedlings (10 cm shoot stage)53.363537.68956.281653.3939
NODDeveloping tillers at six leaf stage, 3rd internode31.602923.129822.231675.3353
CAR5Developing grain, bracts removed (5 DPA)46.053350.602147.970750.5205
CAR15Developing grain, bracts removed (15 DPA)17.965212.725515.578838.9299



CDS Structure of MLOC_59736






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_59736.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK366840NoneNoneNoneNone
MLOC_59736.3CUST_4183_PI427708080AvailableAvailablecontig_43872 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g04260.1 +3 4e-141 413 226/298 (76%) 13102.m00436 protein expressed protein
TAIR PP10 AT5G11810.1 +3 1e-53 185 116/295 (39%) unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:3808739-3810440 FORWARD LENGTH=306