MLOC_59726 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains39.406237.212438.603335.2889
LEAShoots from the seedlings (10 cm shoot stage)644.56870.4854194.734245.7
INF1Young developing inflorescences (5mm)15.56871.087780.9076135.12572
INF2Developing inflorescences (1-1.5 cm)0.5922380.4324483.339591.22667
ROORoots from the seedlings (10 cm shoot stage)6.1888516.336322.091115.8222
NODDeveloping tillers at six leaf stage, 3rd internode5.2582.898870.02486115.52676
CAR5Developing grain, bracts removed (5 DPA)0.03088940.029002600.0304697
CAR15Developing grain, bracts removed (15 DPA)0.1536230.05767310.1103330.268483



CDS Structure of MLOC_59726






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_59726.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_59726.1CUST_14024_PI427708080AvailableAvailablecontig_43862 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g40260.1 +2 4e-168 490 274/438 (63%) 13102.m04482 protein uncharacterized protein At4g06744 precursor, putative, expressed
TAIR PP10 AT4G06744.1 +2 7e-80 260 156/349 (45%) Leucine-rich repeat (LRR) family protein | chr4:4070870-4072084 REVERSE LENGTH=404