- Predicted Gene MLOC_59720
MLOC_59720 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_59720_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 25.4436 | 17.0664 | 22.4343 | 15.1529 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 30.1025 | 27.6275 | 41.8924 | 20.8401 |
INF1 | Young developing inflorescences (5mm) | 31.262 | 35.833 | 37.5427 | 19.5047 |
INF2 | Developing inflorescences (1-1.5 cm) | 23.8778 | 27.8727 | 29.0567 | 21.1388 |
ROO | Roots from the seedlings (10 cm shoot stage) | 42.6586 | 24.885 | 26.6461 | 24.8912 |
NOD | Developing tillers at six leaf stage, 3rd internode | 21.4601 | 20.446 | 25.7905 | 54.9301 |
CAR5 | Developing grain, bracts removed (5 DPA) | 16.1037 | 15.8212 | 18.8485 | 11.3231 |
CAR15 | Developing grain, bracts removed (15 DPA) | 9.63105 | 7.87127 | 11.1271 | 13.778 |
CDS Structure of MLOC_59720
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_59720.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g58640.1 |
+3 |
5e-59 |
192 |
89/90 (99%) |
13104.m06164 protein cleavage and polyadenylation specificity factor subunit 5, putative, expressed |
TAIR PP10 |
AT4G25550.1 |
+3 |
6e-55 |
181 |
80/89 (90%) |
Cleavage/polyadenylation specificity factor, 25kDa subunit | chr4:13048519-13050873 FORWARD LENGTH=200 |