- Predicted Gene MLOC_59709
MLOC_59709 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_59709_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_59709_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0.823598 | 1.72312 | 1.75448 | 1.62199 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 1.03636 | 0.812682 | 0.910666 | 0.866509 |
INF1 | Young developing inflorescences (5mm) | 2.59443 | 2.67511 | 3.00089 | 2.38112 |
INF2 | Developing inflorescences (1-1.5 cm) | 3.88573 | 3.66878 | 3.31272 | 4.16338 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.820673 | 0.663896 | 0.859943 | 0.979885 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.144765 | 0.454599 | 0.409534 | 1.62227 |
CAR5 | Developing grain, bracts removed (5 DPA) | 7.84888 | 6.1484 | 7.3809 | 7.23799 |
CAR15 | Developing grain, bracts removed (15 DPA) | 3.37618 | 3.49737 | 2.12892 | 7.43277 |
CDS Structure of MLOC_59709
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_59709.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g03070.1 |
+1 |
0.0 |
1283 |
666/799 (83%) |
13101.m00256 protein transposon protein, putative, unclassified, expressed |
TAIR PP10 |
AT4G11420.1 |
+1 |
0.0 |
1058 |
543/799 (68%) |
| Symbols: EIF3A, ATEIF3A-1, EIF3A-1, ATTIF3A1, TIF3A1 | eukaryotic translation initiation factor 3A | chr4:6947834-6952053 REVERSE LENGTH=987 |