MLOC_59703 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains7.081578.863249.125378.28469
LEAShoots from the seedlings (10 cm shoot stage)6.423975.736375.895175.05526
INF1Young developing inflorescences (5mm)27.346126.210925.890221.32
INF2Developing inflorescences (1-1.5 cm)25.094225.426124.774326.4879
ROORoots from the seedlings (10 cm shoot stage)5.8179310.50138.9746511.2832
NODDeveloping tillers at six leaf stage, 3rd internode0.6731320.8237312.576183.57008
CAR5Developing grain, bracts removed (5 DPA)14.109513.6514.699113.0813
CAR15Developing grain, bracts removed (15 DPA)3.540813.610962.962637.5084



CDS Structure of MLOC_59703






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_59703.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK370945NoneNoneNoneNone
MLOC_59703.1CUST_4181_PI427708080AvailableAvailablecontig_438378 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g27180.1 +1 0.0 1197 657/912 (72%) 13107.m02706 protein tetratricopeptide repeat domain containing protein, expressed
TAIR PP10 AT5G17270.1 +1 0.0 750 432/906 (48%) Protein prenylyltransferase superfamily protein | chr5:5679995-5685597 FORWARD LENGTH=899