MLOC_59692 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.646395.410525.686745.92653
LEAShoots from the seedlings (10 cm shoot stage)9.648496.84598.406247.58413
INF1Young developing inflorescences (5mm)12.7718.165239.333079.16089
INF2Developing inflorescences (1-1.5 cm)8.778127.3402310.64910.4319
ROORoots from the seedlings (10 cm shoot stage)5.761377.635087.081739.31244
NODDeveloping tillers at six leaf stage, 3rd internode27.492119.729334.052871.0909
CAR5Developing grain, bracts removed (5 DPA)7.34775.372436.991296.82873
CAR15Developing grain, bracts removed (15 DPA)7.732247.441356.9804118.8203



CDS Structure of MLOC_59692






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_59692.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_59692.2CUST_17772_PI427708080AvailableAvailablecontig_43830 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g13820.1 +1 0.0 618 332/402 (83%) 13103.m01605 protein protein kinase family protein, putative, expressed
TAIR PP10 AT1G77280.1 +1 1e-110 372 202/378 (53%) Protein kinase protein with adenine nucleotide alpha hydrolases-like domain | chr1:29031468-29035882 REVERSE LENGTH=794