MLOC_59689 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains24.534124.500529.45620
LEAShoots from the seedlings (10 cm shoot stage)29.082817.698617.32940
INF1Young developing inflorescences (5mm)5.976795.605118.265050
INF2Developing inflorescences (1-1.5 cm)4.635864.155324.116820
ROORoots from the seedlings (10 cm shoot stage)25.528527.737427.310
NODDeveloping tillers at six leaf stage, 3rd internode36.408626.664634.85920
CAR5Developing grain, bracts removed (5 DPA)8.031177.775067.949990
CAR15Developing grain, bracts removed (15 DPA)1.809563.839462.736030



CDS Structure of MLOC_59689






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK252358.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK252358.1CUST_19143_PI427708080NoneNoneNone
MLOC_25463.1NoneAvailableNonecontig_1693002 (Mapped)
MLOC_28012.1NoneAvailableNonecontig_188327 (Not mapped)
MLOC_28132.1NoneAvailableNonecontig_189406 (Mapped)
MLOC_35957.1NoneAvailableAvailablecontig_252742 (Mapped)
MLOC_41448.2NoneAvailableNonecontig_2588825 (Mapped)
MLOC_59689.1NoneAvailableNonecontig_438270 (Mapped)
MLOC_61546.2NoneAvailableNonecontig_45617 (Mapped)
MLOC_79125.1NoneAvailableNonecontig_835039 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----