MLOC_59660 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.771831.570061.907591.78771
LEAShoots from the seedlings (10 cm shoot stage)1.529121.066921.524891.21158
INF1Young developing inflorescences (5mm)0.281880.4772810.6664450.404708
INF2Developing inflorescences (1-1.5 cm)0.7683420.7906730.4749050.788622
ROORoots from the seedlings (10 cm shoot stage)2.060971.664621.935492.09724
NODDeveloping tillers at six leaf stage, 3rd internode3.471215.03415.9738516.4523
CAR5Developing grain, bracts removed (5 DPA)4.701544.718384.485924.68495
CAR15Developing grain, bracts removed (15 DPA)0.2877690.2216090.6020450.794844



CDS Structure of MLOC_59660






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_59660.12
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_59660.12CUST_8170_PI427708083AvailableAvailablecontig_437981 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g37710.1 +3 8e-44 155 82/134 (61%) 13104.m03608 protein serine hydrolase domain containing protein, expressed
TAIR PP10 AT5G65400.1 +3 1e-33 127 67/131 (51%) alpha/beta-Hydrolases superfamily protein | chr5:26131448-26133062 FORWARD LENGTH=252