MLOC_59656 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains10.344810.187413.65250
LEAShoots from the seedlings (10 cm shoot stage)10.57295.868193.006950
INF1Young developing inflorescences (5mm)0.3084820.1602110.4155380
INF2Developing inflorescences (1-1.5 cm)0.3458770.23487200
ROORoots from the seedlings (10 cm shoot stage)7.9808211.12357.823550
NODDeveloping tillers at six leaf stage, 3rd internode242.453102.088164.4110
CAR5Developing grain, bracts removed (5 DPA)00.3365030.4069050
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_59656






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_59656.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK357516NoneNoneNoneNone
MLOC_59656.1CUST_4175_PI427708080AvailableNonecontig_43796 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g62980.1 +2 3e-42 149 68/81 (84%) 13101.m06756 protein LTPL101 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
TAIR PP10 AT5G05960.1 +2 9e-32 119 53/81 (65%) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | chr5:1790256-1790694 FORWARD LENGTH=116