- Predicted Gene MLOC_59654
MLOC_59654 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 9.94597 | 9.74301 | 11.1641 | 9.9389 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 18.6732 | 18.8225 | 23.2976 | 15.205 |
| INF1 | Young developing inflorescences (5mm) | 14.5626 | 13.3545 | 12.2503 | 11.9078 |
| INF2 | Developing inflorescences (1-1.5 cm) | 4.83203 | 4.55547 | 5.79728 | 5.67895 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 1.08218 | 3.01092 | 4.17673 | 3.06269 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 34.2864 | 33.1935 | 47.1311 | 85.7276 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 20.3713 | 22.7062 | 19.6892 | 21.2854 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 3.16235 | 3.72205 | 3.37173 | 8.92973 |
CDS Structure of MLOC_59654
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_59654.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os09g28630.1 |
-3 |
1e-155 |
452 |
242/310 (78%) |
13109.m02825 protein gibberellin receptor, putative, expressed |
| TAIR PP10 |
AT1G47480.1 |
-3 |
2e-62 |
210 |
121/293 (41%) |
alpha/beta-Hydrolases superfamily protein | chr1:17417623-17419296 FORWARD LENGTH=314 |
