MLOC_59632 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.653696.151726.3426.70904
LEAShoots from the seedlings (10 cm shoot stage)8.841279.279127.27888.11491
INF1Young developing inflorescences (5mm)8.993779.184428.118878.28533
INF2Developing inflorescences (1-1.5 cm)11.778912.467711.20714.5457
ROORoots from the seedlings (10 cm shoot stage)3.271656.690185.112838.84786
NODDeveloping tillers at six leaf stage, 3rd internode4.362426.031926.0340721.4639
CAR5Developing grain, bracts removed (5 DPA)6.081195.040446.054916.22869
CAR15Developing grain, bracts removed (15 DPA)4.0333.745284.5263410.3497



CDS Structure of MLOC_59632






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_59632.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK365100NoneNoneNoneNone
MLOC_59632.2CUST_4171_PI427708080AvailableAvailablecontig_43776 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g19830.1 +3 0.0 932 609/1256 (48%) 13109.m01868 protein histone-lysine N-methyltransferase, putative, expressed
TAIR PP10 AT2G22740.1 +3 1e-155 493 288/536 (54%) | Symbols: SUVH6, SDG23 | SU(VAR)3-9 homolog 6 | chr2:9664256-9666628 REVERSE LENGTH=790