MLOC_5963 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains24.68559.248751.61990
LEAShoots from the seedlings (10 cm shoot stage)56.548851.753342.48310
INF1Young developing inflorescences (5mm)64.095264.795156.86350
INF2Developing inflorescences (1-1.5 cm)63.216669.282256.2720
ROORoots from the seedlings (10 cm shoot stage)22.603842.472429.42970
NODDeveloping tillers at six leaf stage, 3rd internode35.745234.433728.98570
CAR5Developing grain, bracts removed (5 DPA)56.062455.630558.0010
CAR15Developing grain, bracts removed (15 DPA)28.440925.657726.01890



CDS Structure of MLOC_5963






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK249855.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK249855.1CUST_23296_PI427708080NoneNoneNone
MLOC_5963.2NoneAvailableNonecontig_136926 (Mapped)
MLOC_75380.3NoneAvailableNonecontig_67781 (Mapped)
MLOC_78081.1NoneAvailableAvailablecontig_7857 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----