- Predicted Gene MLOC_59624
MLOC_59624 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0 | 0 | 0 | 0 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0 | 0 | 0 | 0 |
| INF1 | Young developing inflorescences (5mm) | 0.226581 | 0.375242 | 0 | 0.280711 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.104458 | 0.0983825 | 0.390594 | 0.212931 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 0.452354 | 0.774395 | 0.748467 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0.0393133 | 0.0375081 | 0.192331 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.650767 | 0.120473 | 0.135481 | 0.278689 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.116262 | 0.762464 | 0.515103 | 1.09658 |
CDS Structure of MLOC_59624
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_59624.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os08g07870.1 |
-2 |
1e-33 |
128 |
71/130 (55%) |
13108.m00810 protein retrotransposon protein, putative, unclassified |
| TAIR PP10 |
ATMG00820.1 |
-2 |
5e-19 |
81 |
51/106 (48%) |
| Symbols: ORF170 | Reverse transcriptase (RNA-dependent DNA polymerase) | chrM:228573-229085 REVERSE LENGTH=170 |