MLOC_5962 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.212736.461026.239046.50647
LEAShoots from the seedlings (10 cm shoot stage)2.199652.662211.623761.94182
INF1Young developing inflorescences (5mm)1.437391.478092.025641.52834
INF2Developing inflorescences (1-1.5 cm)1.917282.450752.857932.8581
ROORoots from the seedlings (10 cm shoot stage)7.195278.247696.154810.054
NODDeveloping tillers at six leaf stage, 3rd internode0.343850.4608850.5326361.52809
CAR5Developing grain, bracts removed (5 DPA)3.525183.796924.075174.20193
CAR15Developing grain, bracts removed (15 DPA)0.9986641.415550.5673762.7921



CDS Structure of MLOC_5962






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK363765
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK363765CUST_20775_PI427708080NoneNoneNone
MLOC_5962.2NoneAvailableAvailablecontig_136922 (Mapped)
MLOC_65692.2NoneAvailableNonecontig_50528 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----