MLOC_59606 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.7507760.879631.23550.862547
LEAShoots from the seedlings (10 cm shoot stage)2.951626.025477.839344.35563
INF1Young developing inflorescences (5mm)1.455151.729352.208081.365
INF2Developing inflorescences (1-1.5 cm)2.00331.487811.981351.88458
ROORoots from the seedlings (10 cm shoot stage)0.6917021.626591.55681.63243
NODDeveloping tillers at six leaf stage, 3rd internode0.4249210.3509150.444951.19756
CAR5Developing grain, bracts removed (5 DPA)0.8610630.6992950.7828570.725567
CAR15Developing grain, bracts removed (15 DPA)0.2639420.05218490.2443510.412317



CDS Structure of MLOC_59606






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_59606.14
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK376485NoneNoneNoneNone
MLOC_59606.14NoneAvailableAvailablecontig_43759 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g58880.1 +1 0.0 546 299/604 (50%) 13104.m06204 protein exo70 exocyst complex subunit, putative, expressed
TAIR PP10 AT5G03540.1 +1 2e-167 499 285/601 (47%) | Symbols: ATEXO70A1, EXO70A1 | exocyst subunit exo70 family protein A1 | chr5:889606-893916 FORWARD LENGTH=638