MLOC_59596 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains8.412335.917278.85917.37797
LEAShoots from the seedlings (10 cm shoot stage)7.154784.7893216.28037.50554
INF1Young developing inflorescences (5mm)5.674219.5259411.06937.70297
INF2Developing inflorescences (1-1.5 cm)3.549683.1578812.76786.33023
ROORoots from the seedlings (10 cm shoot stage)37.962625.607218.107429.3011
NODDeveloping tillers at six leaf stage, 3rd internode7.6250311.05677.1765929.0361
CAR5Developing grain, bracts removed (5 DPA)6.113445.86713.828385.34564
CAR15Developing grain, bracts removed (15 DPA)0.5613150.3443430.2423231.00846



CDS Structure of MLOC_59596






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_59596.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK369433NoneNoneNoneNone
MLOC_59596.1CUST_4166_PI427708080AvailableAvailablecontig_43747 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g03034.1 -1 0.0 593 277/336 (82%) 13103.m00278 protein flavonol synthase/flavanone 3-hydroxylase, putative, expressed
TAIR PP10 AT5G24530.1 -1 2e-151 446 210/338 (62%) | Symbols: DMR6 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr5:8378964-8383154 FORWARD LENGTH=341