- Predicted Gene MLOC_59580
MLOC_59580 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_59580_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_59580_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 27.3165 | 38.12 | 34.7039 | 34.9569 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 30.3228 | 35.9814 | 44.0649 | 31.6862 |
INF1 | Young developing inflorescences (5mm) | 18.3272 | 16.7933 | 16.045 | 14.1181 |
INF2 | Developing inflorescences (1-1.5 cm) | 16.7378 | 17.9961 | 18.5755 | 19.1947 |
ROO | Roots from the seedlings (10 cm shoot stage) | 31.3457 | 41.1739 | 30.042 | 47.8308 |
NOD | Developing tillers at six leaf stage, 3rd internode | 21.2153 | 16.1367 | 17.7327 | 55.6821 |
CAR5 | Developing grain, bracts removed (5 DPA) | 32.9258 | 33.5737 | 33.3512 | 32.4029 |
CAR15 | Developing grain, bracts removed (15 DPA) | 10.1553 | 10.9282 | 11.4484 | 23.4915 |
CDS Structure of MLOC_59580
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_59580.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os09g12560.2 |
-1 |
0.0 |
748 |
406/469 (87%) |
13109.m01137 protein ferrochelatase-2, chloroplast precursor, putative, expressed |
TAIR PP10 |
AT5G26030.2 |
-1 |
0.0 |
559 |
287/379 (76%) |
| Symbols: FC1, FC-I, ATFC-I | ferrochelatase 1 | chr5:9096675-9098752 FORWARD LENGTH=466 |