MLOC_5958 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 90.487 | 76.0472 | 74.586 | 82.6896 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 89.1074 | 108.296 | 111.827 | 88.468 |
| INF1 | Young developing inflorescences (5mm) | 97.8562 | 97.8688 | 92.153 | 84.7778 |
| INF2 | Developing inflorescences (1-1.5 cm) | 69.9749 | 80.3553 | 77.9088 | 87.2787 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 48.7866 | 86.1689 | 73.0152 | 98.1246 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 62.0634 | 52.8263 | 63.6957 | 164.674 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 91.0474 | 95.4155 | 93.9256 | 96.5996 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 34.0208 | 36.5894 | 31.1819 | 84.2006 |
CDS Structure of MLOC_5958
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_5958.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g21550.2 |
-1 |
7e-164 |
479 |
248/270 (92%) |
13103.m02584 protein eukaryotic translation initiation factor 2 subunit beta, putative, expressed |
| TAIR PP10 |
AT5G20920.3 |
-1 |
1e-112 |
346 |
192/270 (71%) |
| Symbols: EIF2 BETA | eukaryotic translation initiation factor 2 beta subunit | chr5:7094994-7096661 REVERSE LENGTH=268 |
