MLOC_59568 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.875180.8299051.14740.897376
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0.0290855000.025903
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)6.682935.357674.220945.41743
NODDeveloping tillers at six leaf stage, 3rd internode0.0240648000.00115927
CAR5Developing grain, bracts removed (5 DPA)0.04092430.039298200.0425663
CAR15Developing grain, bracts removed (15 DPA)00.029714600.113356



CDS Structure of MLOC_59568






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_59568.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK370470NoneNoneNoneNone
AK370891NoneNoneNoneNone
MLOC_59568.2CUST_4162_PI427708080AvailableAvailablecontig_43723 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g46840.1 +3 9e-118 350 219/268 (82%) 13107.m04961 protein oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed
TAIR PP10 AT3G26770.1 +3 1e-69 226 133/269 (49%) NAD(P)-binding Rossmann-fold superfamily protein | chr3:9845494-9847079 FORWARD LENGTH=306