- Predicted Gene MLOC_59568
MLOC_59568 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_59568_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_59568_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 0.87518 | 0.829905 | 1.1474 | 0.897376 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0 | 0 | 0 | 0 |
INF1 | Young developing inflorescences (5mm) | 0.0290855 | 0 | 0 | 0.025903 |
INF2 | Developing inflorescences (1-1.5 cm) | 0 | 0 | 0 | 0 |
ROO | Roots from the seedlings (10 cm shoot stage) | 6.68293 | 5.35767 | 4.22094 | 5.41743 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.0240648 | 0 | 0 | 0.00115927 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.0409243 | 0.0392982 | 0 | 0.0425663 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0 | 0.0297146 | 0 | 0.113356 |
CDS Structure of MLOC_59568
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_59568.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os07g46840.1 |
+3 |
9e-118 |
350 |
219/268 (82%) |
13107.m04961 protein oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed |
TAIR PP10 |
AT3G26770.1 |
+3 |
1e-69 |
226 |
133/269 (49%) |
NAD(P)-binding Rossmann-fold superfamily protein | chr3:9845494-9847079 FORWARD LENGTH=306 |