- Predicted Gene MLOC_59549
MLOC_59549 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 24.5549 | 32.9412 | 30.4285 | 27.0715 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 28.6498 | 32.2904 | 37.5862 | 24.644 |
| INF1 | Young developing inflorescences (5mm) | 18.9254 | 16.5773 | 14.5821 | 13.1778 |
| INF2 | Developing inflorescences (1-1.5 cm) | 15.376 | 17.3486 | 17.1558 | 16.235 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 36.2656 | 35.0506 | 28.2832 | 34.9223 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 57.2927 | 91.788 | 82.0284 | 238.689 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 79.5275 | 80.6132 | 79.7411 | 67.6796 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 53.364 | 45.2629 | 44.0234 | 102.442 |
CDS Structure of MLOC_59549
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_59549.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os12g39420.9 |
+1 |
0.0 |
867 |
457/530 (86%) |
13112.m04081 protein nucleobase-ascorbate transporter, putative, expressed |
| TAIR PP10 |
AT2G26510.1 |
+1 |
0.0 |
616 |
326/527 (62%) |
| Symbols: PDE135 | Xanthine/uracil permease family protein | chr2:11274118-11277464 FORWARD LENGTH=551 |
