MLOC_59533 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains474.826330.121329.152372.874
LEAShoots from the seedlings (10 cm shoot stage)194.454200.674202.95164.89
INF1Young developing inflorescences (5mm)121.348118.171121.593106.227
INF2Developing inflorescences (1-1.5 cm)146.874141.99157.301166.515
ROORoots from the seedlings (10 cm shoot stage)539.475401.399358.63493.915
NODDeveloping tillers at six leaf stage, 3rd internode525.389583.23756.6921756.09
CAR5Developing grain, bracts removed (5 DPA)301.765337.867320.933331.365
CAR15Developing grain, bracts removed (15 DPA)62.598163.329956.5539147.997



CDS Structure of MLOC_59533






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_59533.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK372184NoneNoneNoneNone
MLOC_59533.1CUST_4155_PI427708080AvailableAvailablecontig_43692 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g73990.1 -1 3e-83 251 121/130 (93%) 13101.m08083 protein cytochrome b5-like Heme/Steroid binding domain containing protein, expressed
TAIR PP10 AT2G32720.1 -1 9e-72 221 104/128 (81%) | Symbols: B5 #4, ATCB5-B, CB5-B | cytochrome B5 isoform B | chr2:13877013-13878447 REVERSE LENGTH=134