- Predicted Gene MLOC_59532
MLOC_59532 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 3.46357 | 5.00291 | 4.65997 | 4.68204 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 3.27854 | 0.805144 | 1.23477 | 1.56903 |
| INF1 | Young developing inflorescences (5mm) | 6.03137 | 5.6899 | 6.2459 | 5.18719 |
| INF2 | Developing inflorescences (1-1.5 cm) | 4.56593 | 5.05935 | 5.15218 | 5.45337 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.923335 | 2.17241 | 2.44486 | 2.41779 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.701482 | 0.44742 | 0.874923 | 1.66173 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 5.34268 | 6.17016 | 5.85274 | 5.77719 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.45194 | 0.879895 | 1.3995 | 2.89396 |
CDS Structure of MLOC_59532
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_59532.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os07g10400.1 |
+3 |
0.0 |
778 |
396/541 (73%) |
13107.m01056 protein pentatricopeptide, putative, expressed |
| TAIR PP10 |
AT5G40610.1 |
+2 |
1e-174 |
529 |
268/377 (71%) |
NAD-dependent glycerol-3-phosphate dehydrogenase family protein | chr5:16265071-16267258 REVERSE LENGTH=400 |
