- Predicted Gene MLOC_59531
MLOC_59531 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_59531_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_59531_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 18.1652 | 25.8246 | 21.1828 | 25.9479 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 46.4909 | 40.116 | 32.1507 | 37.1221 |
INF1 | Young developing inflorescences (5mm) | 23.4732 | 20.5842 | 23.2813 | 20.2598 |
INF2 | Developing inflorescences (1-1.5 cm) | 18.4914 | 18.6831 | 17.347 | 21.8564 |
ROO | Roots from the seedlings (10 cm shoot stage) | 4.66825 | 11.0452 | 8.17878 | 13.9355 |
NOD | Developing tillers at six leaf stage, 3rd internode | 11.2626 | 11.3659 | 16.2834 | 45.6554 |
CAR5 | Developing grain, bracts removed (5 DPA) | 14.2168 | 12.393 | 14.6567 | 14.7201 |
CAR15 | Developing grain, bracts removed (15 DPA) | 3.99271 | 3.64032 | 4.42948 | 9.84287 |
CDS Structure of MLOC_59531
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_59531.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os08g09270.1 |
+3 |
0.0 |
919 |
490/611 (80%) |
13108.m00976 protein pentatricopeptide, putative, expressed |
TAIR PP10 |
AT3G59040.1 |
+3 |
0.0 |
672 |
328/482 (68%) |
Tetratricopeptide repeat (TPR)-like superfamily protein | chr3:21821495-21824233 REVERSE LENGTH=583 |