MLOC_59521 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.288731.572221.967542.03208
LEAShoots from the seedlings (10 cm shoot stage)97.288216.453210.967168.717
INF1Young developing inflorescences (5mm)0.5087550.6187510.498450.519121
INF2Developing inflorescences (1-1.5 cm)0.3429410.5415470.4084950.553174
ROORoots from the seedlings (10 cm shoot stage)1.884281.61672.202422.4208
NODDeveloping tillers at six leaf stage, 3rd internode46.603448.288355.0471187.215
CAR5Developing grain, bracts removed (5 DPA)15.01623.843119.184122.9447
CAR15Developing grain, bracts removed (15 DPA)3.340484.826153.5441410.3786



CDS Structure of MLOC_59521






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_59521.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK251270.1NoneNoneNoneNone
MLOC_59521.2CUST_4153_PI427708080AvailableAvailablecontig_43682 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g41340.1 -3 0.0 538 295/336 (88%) 13104.m04056 protein 4-nitrophenylphosphatase, putative, expressed
TAIR PP10 AT5G36700.4 -3 2e-170 489 259/295 (88%) | Symbols: PGLP1 | 2-phosphoglycolate phosphatase 1 | chr5:14421929-14424430 REVERSE LENGTH=362