- Predicted Gene MLOC_59520
MLOC_59520 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 3.35175 | 3.40647 | 3.34374 | 3.4957 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 4.65503 | 5.08929 | 5.41367 | 4.24985 |
| INF1 | Young developing inflorescences (5mm) | 3.58472 | 4.32186 | 4.26162 | 3.47739 |
| INF2 | Developing inflorescences (1-1.5 cm) | 4.62832 | 4.38096 | 4.82059 | 5.16074 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 4.24813 | 5.61576 | 6.27384 | 6.54012 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 3.77533 | 4.78472 | 7.00667 | 16.3301 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 6.29214 | 6.41383 | 6.70237 | 6.50721 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 4.77966 | 4.16338 | 4.29602 | 10.7403 |
CDS Structure of MLOC_59520
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_59520.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os04g41330.1 |
+3 |
0.0 |
922 |
487/657 (74%) |
13104.m04055 protein expressed protein |
| TAIR PP10 |
AT2G43250.1 |
+3 |
2e-150 |
461 |
273/656 (42%) |
unknown protein; Has 32 Blast hits to 32 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:17977619-17979496 FORWARD LENGTH=625 |