MLOC_59510 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains8.520587.416267.02218.4548
LEAShoots from the seedlings (10 cm shoot stage)2.504980.4981830.5380061.04252
INF1Young developing inflorescences (5mm)9.893886.901255.030996.63708
INF2Developing inflorescences (1-1.5 cm)6.443387.611836.403588.19816
ROORoots from the seedlings (10 cm shoot stage)2.383524.913624.56126.01376
NODDeveloping tillers at six leaf stage, 3rd internode0.06002730.052907800.235823
CAR5Developing grain, bracts removed (5 DPA)6.535256.011566.290686.67053
CAR15Developing grain, bracts removed (15 DPA)0.390850.2893550.3538070.862146



CDS Structure of MLOC_59510






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_59510.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_59510.1CUST_13990_PI427708080AvailableAvailablecontig_436759 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g03130.1 -1 0.0 811 406/421 (96%) 13112.m00268 protein CDC45A - Putative DNA replication initiation protein, expressed
TAIR PP10 AT3G25100.1 -1 0.0 619 301/416 (72%) | Symbols: CDC45 | cell division cycle 45 | chr3:9144292-9146082 FORWARD LENGTH=596