- Predicted Gene MLOC_59505
MLOC_59505 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.382128 | 0.255595 | 0.320412 | 0.332691 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0 | 0.146896 | 0.0655073 | 0.108408 |
| INF1 | Young developing inflorescences (5mm) | 0.137387 | 0.152761 | 0.260758 | 0.163047 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.657133 | 1.24351 | 1.08824 | 1.18098 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 0.0670692 | 0 | 0.20355 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.36198 | 0.400307 | 0.275428 | 1.2929 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 23.6104 | 22.3311 | 20.0896 | 22.9047 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.09371 | 0.989539 | 1.26161 | 2.78772 |
CDS Structure of MLOC_59505
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_59505.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os08g05820.1 |
+3 |
0.0 |
993 |
490/571 (86%) |
13108.m00575 protein monocopper oxidase, putative, expressed |
| TAIR PP10 |
AT4G12420.2 |
+3 |
0.0 |
718 |
352/563 (63%) |
| Symbols: SKU5 | Cupredoxin superfamily protein | chr4:7349941-7352868 REVERSE LENGTH=587 |