MLOC_5950 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 373.233 | 323.175 | 358.207 | 374.566 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 98.8034 | 16.6379 | 13.2813 | 34.9422 |
| INF1 | Young developing inflorescences (5mm) | 774.738 | 807.462 | 770.487 | 749.592 |
| INF2 | Developing inflorescences (1-1.5 cm) | 715.289 | 700.19 | 739.08 | 879.379 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 321.737 | 301.289 | 277.598 | 372.463 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 456.982 | 389.908 | 189.389 | 957.847 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 262.111 | 272.627 | 287.426 | 307.892 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 55.6382 | 26.7441 | 66.5993 | 123.055 |
CDS Structure of MLOC_5950
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_5950.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g21040.2 |
-3 |
0.0 |
623 |
279/320 (87%) |
13103.m02521 protein stress responsive protein, putative, expressed |
| TAIR PP10 |
AT2G39050.1 |
-3 |
6e-62 |
207 |
91/150 (61%) |
hydroxyproline-rich glycoprotein family protein | chr2:16303427-16305336 FORWARD LENGTH=317 |
