- Predicted Gene MLOC_59488
MLOC_59488 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 6.54403 | 8.69611 | 8.80828 | 6.22236 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 9.02933 | 5.86956 | 6.97806 | 4.9623 |
| INF1 | Young developing inflorescences (5mm) | 22.8101 | 20.3934 | 21.03 | 14.6002 |
| INF2 | Developing inflorescences (1-1.5 cm) | 18.199 | 16.1647 | 16.6489 | 15.0249 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 7.9453 | 11.2809 | 11.4222 | 8.84076 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 2.83952 | 1.62371 | 4.84064 | 4.94599 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 16.503 | 15.4383 | 19.6018 | 12.5003 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 6.87973 | 7.30256 | 6.45313 | 13.1764 |
CDS Structure of MLOC_59488
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_59488.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g43890.1 |
-1 |
2e-48 |
178 |
120/160 (75%) |
13103.m04721 protein WD domain, G-beta repeat domain containing protein, expressed |
| TAIR PP10 |
AT5G58230.1 |
-1 |
1e-42 |
160 |
85/102 (83%) |
| Symbols: MSI1, MEE70, ATMSI1 | Transducin/WD40 repeat-like superfamily protein | chr5:23556112-23557994 FORWARD LENGTH=424 |