- Predicted Gene MLOC_59487
MLOC_59487 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_59487_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_59487_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 53.7099 | 64.7538 | 63.8476 | 65.7762 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 4.25113 | 9.17589 | 3.18994 | 4.84345 |
INF1 | Young developing inflorescences (5mm) | 3.00389 | 2.82251 | 1.4156 | 2.2698 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.997104 | 1.34056 | 1.01084 | 1.36052 |
ROO | Roots from the seedlings (10 cm shoot stage) | 17.3568 | 17.682 | 16.4938 | 22.1727 |
NOD | Developing tillers at six leaf stage, 3rd internode | 7.62472 | 13.2704 | 22.6575 | 47.9439 |
CAR5 | Developing grain, bracts removed (5 DPA) | 39.1787 | 39.1037 | 38.3375 | 41.0626 |
CAR15 | Developing grain, bracts removed (15 DPA) | 2.57405 | 2.07602 | 2.29091 | 5.89409 |
CDS Structure of MLOC_59487
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_59487.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os08g38710.1 |
+1 |
0.0 |
1322 |
636/754 (84%) |
13108.m04109 protein uncharacterized glycosyltransferase, putative, expressed |
TAIR PP10 |
AT1G55740.1 |
+1 |
0.0 |
1109 |
533/754 (71%) |
| Symbols: AtSIP1, SIP1 | seed imbibition 1 | chr1:20835507-20838707 REVERSE LENGTH=754 |