- Predicted Gene MLOC_59486
MLOC_59486 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_59486_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_59486_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 2.30764 | 17.4788 | 12.8944 | 15.2323 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 19.5035 | 23.9516 | 17.2196 | 18.2314 |
INF1 | Young developing inflorescences (5mm) | 20.7826 | 24.5956 | 19.912 | 20.9545 |
INF2 | Developing inflorescences (1-1.5 cm) | 28.4027 | 29.654 | 24.0844 | 34.4242 |
ROO | Roots from the seedlings (10 cm shoot stage) | 6.69812 | 15.4466 | 8.65833 | 18.3892 |
NOD | Developing tillers at six leaf stage, 3rd internode | 7.55546 | 11.4753 | 5.60408 | 35.4354 |
CAR5 | Developing grain, bracts removed (5 DPA) | 22.9964 | 21.6812 | 22.1578 | 24.9584 |
CAR15 | Developing grain, bracts removed (15 DPA) | 9.71087 | 10.5734 | 9.1797 | 26.4792 |
CDS Structure of MLOC_59486
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_59486.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os05g48820.1 |
-3 |
5e-157 |
505 |
392/544 (72%) |
13105.m05209 protein DDT, putative, expressed |
TAIR PP10 |
AT1G28420.1 |
-3 |
1e-37 |
152 |
126/428 (29%) |
| Symbols: HB-1 | homeobox-1 | chr1:9979936-9987460 FORWARD LENGTH=1705 |