MLOC_59481 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains947.328571.657587.188662.441
LEAShoots from the seedlings (10 cm shoot stage)308.808221.281303.023215.318
INF1Young developing inflorescences (5mm)751.239744.485784.046672.687
INF2Developing inflorescences (1-1.5 cm)608.366523.267580.153681.34
ROORoots from the seedlings (10 cm shoot stage)663.409554.829656.242689.41
NODDeveloping tillers at six leaf stage, 3rd internode59.907946.1887132.5167.358
CAR5Developing grain, bracts removed (5 DPA)374.467425.42366.874430.152
CAR15Developing grain, bracts removed (15 DPA)77.326872.535672.6456194.538



CDS Structure of MLOC_59481






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_59481.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK376720NoneNoneNoneNone
MLOC_59481.1CUST_4144_PI427708080AvailableAvailablecontig_43651 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g07580.2 +2 1e-36 125 60/62 (97%) 13106.m00790 protein expressed protein
TAIR PP10 AT5G56670.1 +2 2e-36 124 59/62 (95%) Ribosomal protein S30 family protein | chr5:22935413-22935981 REVERSE LENGTH=62