- Predicted Gene MLOC_59475
MLOC_59475 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_59475_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_59475_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 244.529 | 184.409 | 191.562 | 206.621 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 138.508 | 93.4049 | 143.804 | 99.2414 |
INF1 | Young developing inflorescences (5mm) | 79.7972 | 85.3144 | 84.0886 | 74.2766 |
INF2 | Developing inflorescences (1-1.5 cm) | 66.9618 | 81.1607 | 79.1457 | 84.7848 |
ROO | Roots from the seedlings (10 cm shoot stage) | 308.14 | 225.123 | 211.993 | 259.913 |
NOD | Developing tillers at six leaf stage, 3rd internode | 220.815 | 230.408 | 224.648 | 581.197 |
CAR5 | Developing grain, bracts removed (5 DPA) | 127.599 | 136.037 | 121.42 | 129.498 |
CAR15 | Developing grain, bracts removed (15 DPA) | 20.8427 | 19.1911 | 21.1393 | 49.788 |
CDS Structure of MLOC_59475
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_59475.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os11g06890.1 |
-1 |
3e-69 |
219 |
157/159 (99%) |
13111.m00699 protein vacuolar ATP synthase, putative, expressed |
TAIR PP10 |
AT4G34720.1 |
-1 |
9e-68 |
214 |
156/159 (98%) |
| Symbols: AVA-P1, VHA-C1, ATVHA-C1 | ATPase, F0/V0 complex, subunit C protein | chr4:16568223-16569165 REVERSE LENGTH=164 |