- Predicted Gene MLOC_59454
MLOC_59454 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_59454_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_59454_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 0.859416 | 1.017 | 0.851345 | 1.09246 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.279895 | 0.790845 | 0.661493 | 0.543764 |
INF1 | Young developing inflorescences (5mm) | 0.213434 | 0.403838 | 0.223558 | 0.302745 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.415987 | 0.423963 | 0.302558 | 0.527783 |
ROO | Roots from the seedlings (10 cm shoot stage) | 2.01591 | 1.50358 | 1.52366 | 2.04102 |
NOD | Developing tillers at six leaf stage, 3rd internode | 1.61865 | 2.71828 | 5.56701 | 10.3004 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.813513 | 0.450911 | 0.374613 | 0.629377 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.235186 | 0.251654 | 0.161827 | 0.642539 |
CDS Structure of MLOC_59454
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_59454.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g15230.1 |
+3 |
8e-128 |
395 |
324/546 (59%) |
13103.m01785 protein DUF292 domain containing protein, expressed |
TAIR PP10 |
AT1G13340.1 |
+3 |
4e-20 |
94 |
51/144 (35%) |
Regulator of Vps4 activity in the MVB pathway protein | chr1:4569622-4571043 REVERSE LENGTH=409 |