MLOC_59428 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)1.162463.108463.40592.23879
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode00.0075937200.0670286
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)00.024612800.0735698



CDS Structure of MLOC_59428






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_59428.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK367529NoneNoneNoneNone
MLOC_59428.1CUST_18195_PI427708080AvailableAvailablecontig_43578 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g26840.1 +2 1e-111 350 234/542 (43%) 13108.m02762 protein plant protein of unknown function domain containing protein, expressed
TAIR PP10 AT3G50180.1 +2 4e-26 113 130/501 (26%) Plant protein of unknown function (DUF247) | chr3:18604943-18607162 REVERSE LENGTH=588