- Predicted Gene MLOC_59424
MLOC_59424 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 22.3056 | 18.3553 | 17.7714 | 21.8062 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 16.2353 | 10.4556 | 10.8901 | 11.0966 |
| INF1 | Young developing inflorescences (5mm) | 37.2746 | 39.8736 | 41.2322 | 37.6375 |
| INF2 | Developing inflorescences (1-1.5 cm) | 53.4978 | 50.3745 | 56.688 | 65.1325 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 30.7593 | 25.1412 | 31.7312 | 35.5418 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 8.61664 | 13.6095 | 23.8425 | 52.952 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 25.1838 | 26.3694 | 24.2653 | 28.5901 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 30.4543 | 25.9938 | 26.5462 | 73.7174 |
CDS Structure of MLOC_59424
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_59424.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g53910.1 |
+2 |
2e-170 |
492 |
290/376 (77%) |
13103.m05904 protein tetratricopeptide repeat domain containing protein, expressed |
| TAIR PP10 |
AT1G04130.1 |
+2 |
7e-117 |
354 |
201/371 (54%) |
| Symbols: TPR2, AtTPR2 | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:1073465-1075374 FORWARD LENGTH=360 |