MLOC_59401 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.217794.135384.069183.71444
LEAShoots from the seedlings (10 cm shoot stage)8.244881.055222.205273.57725
INF1Young developing inflorescences (5mm)12.691312.98112.188310.537
INF2Developing inflorescences (1-1.5 cm)12.567516.447211.708915.5459
ROORoots from the seedlings (10 cm shoot stage)0.7791262.263511.597392.55637
NODDeveloping tillers at six leaf stage, 3rd internode4.318745.851043.5329719.1257
CAR5Developing grain, bracts removed (5 DPA)12.23413.013114.105712.9419
CAR15Developing grain, bracts removed (15 DPA)4.540193.923394.537519.51113



CDS Structure of MLOC_59401






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_59401.10
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK373102NoneNoneNoneNone
MLOC_59401.10CUST_4127_PI427708080AvailableAvailablecontig_43557 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g42770.4 +2 0.0 948 555/951 (58%) 13104.m04229 protein expressed protein
TAIR PP10 AT4G28760.2 +2 5e-95 325 299/969 (31%) Protein of unknown function (DUF3741) | chr4:14208640-14211811 FORWARD LENGTH=924