MLOC_59391 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.3057180.08874330.4064840.268368
LEAShoots from the seedlings (10 cm shoot stage)0.471892.3674311.48064.95402
INF1Young developing inflorescences (5mm)0.087710100.1078030.163516
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)2.557612.228733.196263.30362
NODDeveloping tillers at six leaf stage, 3rd internode0.4569640.6942040.09834051.9964
CAR5Developing grain, bracts removed (5 DPA)0.5734860.350190.5083110.475554
CAR15Developing grain, bracts removed (15 DPA)0.7103720.7548360.6685031.78213



CDS Structure of MLOC_59391






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_59391.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_59391.1CUST_12839_PI427708083AvailableAvailablecontig_43539 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g08550.1 -2 4e-36 131 56/74 (76%) 13104.m00775 protein oxidoreductase, aldo/keto reductase family protein, putative, expressed
TAIR PP10 AT1G59950.1 -2 1e-20 88 38/75 (51%) NAD(P)-linked oxidoreductase superfamily protein | chr1:22068033-22070588 REVERSE LENGTH=320