MLOC_59388 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.4315710.2677470.2072140.290529
LEAShoots from the seedlings (10 cm shoot stage)0.40277200.09938980.216074
INF1Young developing inflorescences (5mm)0.6539450.7381850.339570.535623
INF2Developing inflorescences (1-1.5 cm)000.04909810.0412357
ROORoots from the seedlings (10 cm shoot stage)2.147761.165720.6642161.29267
NODDeveloping tillers at six leaf stage, 3rd internode2.459990.1586770.01360650.214604
CAR5Developing grain, bracts removed (5 DPA)0.5848670.2016340.1461980.307352
CAR15Developing grain, bracts removed (15 DPA)0.3014130.1201510.09548530.483715



CDS Structure of MLOC_59388






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_59388.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK248273.1NoneNoneNoneNone
MLOC_59388.1CUST_4124_PI427708080AvailableAvailablecontig_43536 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g08310.1 +3 6e-27 107 91/183 (50%) 13103.m00954 protein ZIM domain containing protein, putative, expressed
TAIR PP10None-----