MLOC_5938 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 15.9849 | 22.0172 | 19.8043 | 18.7457 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 19.845 | 13.3692 | 14.1016 | 13.2007 |
| INF1 | Young developing inflorescences (5mm) | 64.2482 | 62.2302 | 51.7535 | 48.6274 |
| INF2 | Developing inflorescences (1-1.5 cm) | 50.8662 | 51.3683 | 46.9496 | 51.7291 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 15.6425 | 26.46 | 22.0221 | 26.8123 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 6.32419 | 6.99044 | 9.10969 | 19.3068 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 41.3131 | 37.7867 | 39.9252 | 35.6645 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 6.95042 | 7.35083 | 5.40842 | 14.748 |
CDS Structure of MLOC_5938
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_5938.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os05g28510.4 |
-3 |
0.0 |
1514 |
788/868 (91%) |
13105.m02937 protein importin subunit beta, putative, expressed |
| TAIR PP10 |
AT3G08947.1 |
-3 |
0.0 |
1119 |
574/864 (66%) |
ARM repeat superfamily protein | chr3:2724007-2726722 FORWARD LENGTH=873 |
