MLOC_5937 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.605911 | 1.08411 | 0.424468 | 0.85296 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 18.592 | 4.14221 | 6.84437 | 8.07996 |
| INF1 | Young developing inflorescences (5mm) | 0 | 0 | 0.0222159 | 0.00663161 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.0186565 | 0 | 0 | 0.00808014 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 3.35327 | 1.6058 | 1.83211 | 2.23679 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 48.4474 | 78.2239 | 92.229 | 282.608 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.161895 | 0.173121 | 0.0890361 | 0.160821 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.0667345 | 0.0206365 | 0.0492105 | 0.131892 |
CDS Structure of MLOC_5937
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_5937.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os05g28520.2 |
+1 |
0.0 |
528 |
260/337 (77%) |
13105.m10318 protein MRH1, putative, expressed |
| TAIR PP10 |
AT4G18640.1 |
+1 |
5e-110 |
348 |
173/338 (51%) |
| Symbols: MRH1 | Leucine-rich repeat protein kinase family protein | chr4:10260481-10263577 FORWARD LENGTH=678 |
