MLOC_59365 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.2567421.5499901.17558
LEAShoots from the seedlings (10 cm shoot stage)0.4106810.42443800.324283
INF1Young developing inflorescences (5mm)00.23352400.170208
INF2Developing inflorescences (1-1.5 cm)00.8750250.2586550.620659
ROORoots from the seedlings (10 cm shoot stage)00.4999690.7870130.657864
NODDeveloping tillers at six leaf stage, 3rd internode0.2091060.5765670.411591.453
CAR5Developing grain, bracts removed (5 DPA)0.2422410.2168030.2660410.191846
CAR15Developing grain, bracts removed (15 DPA)0.261521000.957371



CDS Structure of MLOC_59365






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_59365.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_59365.1CUST_8143_PI427708083AvailableAvailablecontig_43517 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g44440.1 -3 2e-19 68 33/70 (47%) 13102.m04961 protein retrotransposon protein, putative, unclassified
TAIR PP10None-----