MLOC_59360 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.109052000.131091
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)00.073586200.326585
ROORoots from the seedlings (10 cm shoot stage)1.182030.5343170.5307521.0623
NODDeveloping tillers at six leaf stage, 3rd internode0.064756500.02686390.0437954
CAR5Developing grain, bracts removed (5 DPA)0.09538490.08816230.1870010.180891
CAR15Developing grain, bracts removed (15 DPA)0000.439517



CDS Structure of MLOC_59360






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_59360.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_59360.1CUST_8140_PI427708083AvailableAvailablecontig_43513 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g54300.1 +1 6e-36 124 66/88 (75%) 13104.m05612 protein wound induced protein, putative, expressed
TAIR PP10 AT4G10270.1 +1 1e-21 86 48/92 (52%) Wound-responsive family protein | chr4:6374805-6375077 FORWARD LENGTH=90