MLOC_59359 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.262893.367932.667013.27656
LEAShoots from the seedlings (10 cm shoot stage)1.985522.637131.600491.7641
INF1Young developing inflorescences (5mm)1.133761.916170.7659891.13957
INF2Developing inflorescences (1-1.5 cm)0.3823080.5129270.4152320.517226
ROORoots from the seedlings (10 cm shoot stage)15.468412.773517.213516.5236
NODDeveloping tillers at six leaf stage, 3rd internode0.4261570.3344360.4236771.122
CAR5Developing grain, bracts removed (5 DPA)2.093222.14251.542661.99026
CAR15Developing grain, bracts removed (15 DPA)10.61048.908838.2778422.8609



CDS Structure of MLOC_59359






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_59359.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_59359.1CUST_8139_PI427708083AvailableAvailablecontig_43513 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g13540.1 +2 2e-50 191 106/207 (51%) 13106.m01489 protein retrotransposon protein, putative, unclassified
TAIR PP10 AT4G10270.1 +2 7e-21 90 49/92 (53%) Wound-responsive family protein | chr4:6374805-6375077 FORWARD LENGTH=90