MLOC_59323 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.8338150.6748970.4735580.746496
LEAShoots from the seedlings (10 cm shoot stage)0.07922130.4420411.42130.678008
INF1Young developing inflorescences (5mm)0.04115820.06826900.0585394
INF2Developing inflorescences (1-1.5 cm)00.01953240.02617070.0546406
ROORoots from the seedlings (10 cm shoot stage)7.57994.44239.254377.17258
NODDeveloping tillers at six leaf stage, 3rd internode0.03589460.02273640.01451790.0780415
CAR5Developing grain, bracts removed (5 DPA)5.973275.668824.902386.07815
CAR15Developing grain, bracts removed (15 DPA)31.506152.353919.053698.1184



CDS Structure of MLOC_59323






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_59323.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_59323.1CUST_13969_PI427708080AvailableAvailablecontig_43476 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g10510.1 +3 0.0 725 346/379 (91%) 13111.m01117 protein dehydrogenase, putative, expressed
TAIR PP10 AT1G77120.1 +3 0.0 634 295/377 (78%) | Symbols: ADH1, ADH, ATADH, ATADH1 | alcohol dehydrogenase 1 | chr1:28975509-28977216 FORWARD LENGTH=379